Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., Pseudouridine synthase, RluD (NCBI) from Rhodospirillum rubrum S1H

 Score = 66.6 bits (161), Expect = 6e-16
 Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 29/221 (13%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDG--DTMLLQEVATQTG--------DGQLYLVHRLDKM 53
           +++   D ++I+K   + VH   G  D  L+  +    G        + +  +VHRLDK 
Sbjct: 104 VVYEDDDLIVIDKAAGMVVHPGPGNPDHTLVNALLAHCGPSLSGIGGERRPGIVHRLDKD 163

Query: 54  TSGILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMER--SRRSSWK 111
           TSG+++ A+   A   L++ FA   + + YL +   +P+   G I   + R  ++R    
Sbjct: 164 TSGLMIAAKTDLAHHGLAEQFACHSLTREYLCLVWGRPRPAAGSIDAPLGRHPTQRKKMA 223

Query: 112 LVNSQENPAITQFFSAAAATG-ERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYN---- 166
           +V+     A+T +       G   +  C   TG+THQ+RV +  IG  ++GD +Y     
Sbjct: 224 VVSRGGKRALTHYRVVGDVEGIASIVKCTLSTGRTHQVRVHMAHIGHPLLGDAVYGHRNI 283

Query: 167 ----TADESD------RGYLHAFALRFTY--QGEVYQWLCD 195
                 D S+      R  LH+F L F +   GE  ++L +
Sbjct: 284 PKKLPGDLSERIARLTRQALHSFHLGFLHPRTGESLEFLSE 324