Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., pseudouridine synthase from Rhodanobacter denitrificans MT42

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 27/207 (13%)

Query: 1   MFDILFTHPDFLLINKHPNVSVHKD----DGDTMLLQEVATQTGDGQLYLVHRLDKMTSG 56
           M DIL+     + +NK  N++VH+       D  L+  +  Q G G +YL HRLD+ TSG
Sbjct: 1   MIDILYQDDALIAVNKPANLAVHRSTFVGSADAFLIDLLREQVG-GDVYLAHRLDRATSG 59

Query: 57  ILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLI---------CGDMERSRR 107
           +LL+AR+   A+ L + F  R V K YL +    P+  + +I          G    +R 
Sbjct: 60  VLLVARSKEVAAALGEQFMNRTVHKQYLVVARGWPEPAEDVIDYPLPGSRETGPRREART 119

Query: 108 SSWKLVNSQENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNT 167
              +L   +   A+ ++     A    L L +P +G+  QIR  L  I   ++GD  +  
Sbjct: 120 RYQRLATIEVPIALGRYPQQRYA----LLLAEPESGRFRQIRKHLAHIHHPVIGDCQHGR 175

Query: 168 ADES---------DRGYLHAFALRFTY 185
            D +          R  LHA+ +RF +
Sbjct: 176 GDHNRLYKQHFGCHRMLLHAWRIRFVH 202