Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 52/190 (27%), Positives = 100/190 (52%), Gaps = 7/190 (3%)

Query: 3   DILFTHPDFLLINKHPNVSVH--KDDGDTMLLQEVAT-QTGDGQLY---LVHRLDKMTSG 56
           ++++   D L+++K  N+ VH  K+     L   ++  Q  + Q Y    V+RLD  T+G
Sbjct: 83  NVIYEDDDLLIVDKSKNMVVHPTKNVLSGTLANAISNHQKINNQNYKIRFVNRLDMDTTG 142

Query: 57  ILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKLVNSQ 116
           +L++A+N+ +  +L++   +  +EK Y+A+ +     K+G+I   ++ +     + +++ 
Sbjct: 143 LLIVAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLKEGIIEDSIDLNENGIKRELSNF 202

Query: 117 ENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY-NTADESDRGY 175
              + T++          +      TG+THQIRV L S G+ I+GD +Y  T+   DR  
Sbjct: 203 GKISKTKYKVIEELKNASVLEINLLTGRTHQIRVHLSSTGNYIIGDTLYGETSKLIDRQA 262

Query: 176 LHAFALRFTY 185
           LH+  LRF +
Sbjct: 263 LHSHILRFIH 272