Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., tRNA pseudouridine synthase TruC from Klebsiella michiganensis M5al

 Score = 63.9 bits (154), Expect = 3e-15
 Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 27/211 (12%)

Query: 1   MFDILFTHPDFLLINKHPNVSVHKD----DGDTMLLQEVATQTGDGQLYLVHRLDKMTSG 56
           M +IL+     + +NK     VH+     D   +++Q V  Q G   ++  HRLD+ TSG
Sbjct: 1   MLEILYQDQWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQ-HVFTAHRLDRPTSG 59

Query: 57  ILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKLV--N 114
           +LL+  ++ A   LSQ F + +++K Y AI       +  L    +E   + + K    N
Sbjct: 60  VLLMGLSSEAGRLLSQQFEQHQMQKRYHAIARGWLNDEAVLDYPLVEELDKIADKFAREN 119

Query: 115 SQENPAITQF-----FSAAAATGE------RLFLCKPHTGKTHQIRVALKSIGSAIVGDP 163
               PA+T +        A ATG        L   +P TG+ HQ+R  L  +   I+GD 
Sbjct: 120 KDPQPAVTHYRGLATVEMAVATGRYPTTRYSLVELEPKTGRKHQLRRHLAHLRHPIIGDS 179

Query: 164 IYNTADES---------DRGYLHAFALRFTY 185
            +    ++         DR  LHA  L  T+
Sbjct: 180 KHGDLRQNRSAAEHFGCDRLMLHASQLSLTH 210