Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase from Klebsiella michiganensis M5al

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 13/197 (6%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTMLLQEV--ATQTGDGQLYLVHRLDKMTSGILLLA 61
           IL+     L++NK    +VH   G +  + E   A +     L LVHRLD+ TSG+LL+A
Sbjct: 109 ILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVA 168

Query: 62  RNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWK---LVNSQEN 118
           +  +A   L +    + ++K YLA+   + +    ++   + ++   S +    VN +  
Sbjct: 169 KKRSALRSLHEQLRDKGMQKDYLALVRGQWQSHTKVVQAPLLKNILQSGERIVRVNQEGK 228

Query: 119 PAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTADES------- 171
           P+ T+F      T   L  C P TG+THQIRV  +  G  I  D  Y   +         
Sbjct: 229 PSETRFKVEERFTHATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDKQLAGTG 288

Query: 172 -DRGYLHAFALRFTYQG 187
            +R +LHA AL+FT+ G
Sbjct: 289 LNRLFLHAAALKFTHPG 305