Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., ribosomal large subunit pseudouridine synthase A (RefSeq) from Shewanella sp. ANA-3

 Score = 69.3 bits (168), Expect = 6e-17
 Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 14/197 (7%)

Query: 3   DILFTHPDFLLINKHPNV-SVHKDDGDTMLLQEVATQTGDGQLYLVHRLDKMTSGILLLA 61
           D+L+   D +++NK   + SV   D           +       +VHRLD  TSG++++A
Sbjct: 15  DVLYQDKDIIVVNKPSGLLSVPGRDPAHYDSVYARVKAEHPHCQIVHRLDMATSGVIVVA 74

Query: 62  RNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQG-----LICGDMERSRRSSWKLVNSQ 116
              +A  EL + F  R+  K YLA  +   K   G     LIC    R ++   K+ +  
Sbjct: 75  LIRSAERELKRQFHDRETSKTYLARVAGHVKNTTGSVDYPLICDWPNRPKQ---KVDHEI 131

Query: 117 ENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYN---TADESDR 173
             P++T F   + A    L   KP TG++HQ+RV + ++G  I+GD  Y        + R
Sbjct: 132 GKPSLTHFEVLSRAKRSTLVKLKPITGRSHQLRVHMMALGHPILGDGFYADPLAKSLAPR 191

Query: 174 GYLHA--FALRFTYQGE 188
             LHA    ++  Y GE
Sbjct: 192 LLLHAAELTIKHPYTGE 208