Pairwise Alignments

Query, 220 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., spermidine/putrescine ABC transporter ATP-binding subunit from Pseudomonas stutzeri RCH2

 Score =  129 bits (325), Expect = 6e-35
 Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 10/197 (5%)

Query: 14  DGHCLLA-EFNLTIAEGEIVSLMGPSGCGKSTLLSVIAGHLATDFTFQGSMKLGDTQLNT 72
           DG  L+  + NL I  GE ++L+GPSG GK+T L ++AG    +    G + L    +N 
Sbjct: 21  DGESLIVRDLNLDIRRGEFLTLLGPSGSGKTTSLMMLAGF---ETPTAGEILLDGRAINN 77

Query: 73  LPAHQRQVGMLFQDDWLFPHLNVWENLAFALPNSIKGEQR---KKNAYAALTKIALTELA 129
           +P H+R +GM+FQ+  LFPH+ V ENLAF  P S++G  +   K+    AL  + L    
Sbjct: 78  VPPHKRDMGMVFQNYALFPHMTVSENLAF--PLSVRGMAKPDIKERVKRALAMVQLEGFR 135

Query: 130 CSFPEQISGGQRARISLMRMLLAEPKLVLLDEPFSKLDKALRSQFRDWVFNQLTSAGIPT 189
             +P Q+SGGQ+ R++L R L+ EP+LVL+DEP   LDK LR Q +  + +     G+  
Sbjct: 136 NRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREQMQMEIKHLHERLGVTV 195

Query: 190 LMVTHDH-EDVPVGSRV 205
           + VTHD  E + +  RV
Sbjct: 196 VYVTHDQGEALTMSDRV 212