Pairwise Alignments

Query, 220 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., spermidine/putrescine transport ATP-binding protein potA from Caulobacter crescentus NA1000

 Score =  127 bits (320), Expect = 2e-34
 Identities = 68/177 (38%), Positives = 108/177 (61%), Gaps = 4/177 (2%)

Query: 23  NLTIAEGEIVSLMGPSGCGKSTLLSVIAGHLATDFTFQGSMKLGDTQLNTLPAHQRQVGM 82
           +LT+ EGE  +L+GPSGCGK+TLL ++AG    +   +G + +    ++ +P ++R V M
Sbjct: 34  SLTVNEGEFFALLGPSGCGKTTLLRMLAGF---ETPTEGRILIDGQDISNVPPNKRPVNM 90

Query: 83  LFQDDWLFPHLNVWENLAFALP-NSIKGEQRKKNAYAALTKIALTELACSFPEQISGGQR 141
           +FQ   +FPH+ V +N+A+ L  +++   +R+     AL  + L  L    P+Q+SGGQR
Sbjct: 91  VFQSYAVFPHMTVADNVAYGLKVDNVPKAEREARVAEALELVQLGGLGGRKPDQLSGGQR 150

Query: 142 ARISLMRMLLAEPKLVLLDEPFSKLDKALRSQFRDWVFNQLTSAGIPTLMVTHDHED 198
            R++L R L+  P+++LLDEP S LD  LR Q R  +       GI  +MVTHD ++
Sbjct: 151 QRVALARALVKRPRVLLLDEPLSALDAKLREQMRTELCTLQEKVGITFIMVTHDQDE 207