Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 17/245 (6%)

Query: 301 LTLLFTISGAMIPLTLIWSLAQRWRFP-DLFPTQWTGQFWYD-EWPNVLHNM----ETSV 354
           L LLF +   ++ + L ++      +P   F  QW   F+   EW   L N       + 
Sbjct: 23  LVLLFLVLPVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFNSAEWMRALKNSMIVAPAAT 82

Query: 355 LLALGSGSLALLLGILAQEYRLHTQRAIPVYIIALPMLLPQLSL-LFGIQVLTLLMASQA 413
           LLA+G G+LA + G+    +     +A+ + ++  PM++P + + +        L    +
Sbjct: 83  LLAMGFGTLAAI-GLTRGNF---PGKALVMALVISPMVVPVVIVGVASYLFFAPLGLGNS 138

Query: 414 YTWWVVWAHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALL 473
           YT  ++  H     P V + +S   Q +N N  + A SLG S    F ++ LPL+ P ++
Sbjct: 139 YTSLIL-VHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPLIAPGVI 197

Query: 474 YAWAVGISVSLAQYLPTLMLGGGRLTTITTEAVALSSGYDRRVTAIYALCQALLPFVFFS 533
                  + S  + + TL L G    T+  +   + SG    ++   A    LL  + FS
Sbjct: 198 SGALFAFATSFDEVVVTLFLAGPEQATLPRQ---MFSGIRENLSPTIAAAATLL--IGFS 252

Query: 534 IALLL 538
           + LLL
Sbjct: 253 VVLLL 257