Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Sulfate ABC transporter, permease protein CysW from Synechococcus elongatus PCC 7942

 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 26/245 (10%)

Query: 303 LLFTISGAMIPLTLIWSLAQRWRFPDLFPTQWTGQFWYDEWPNVLHNMETSVLLALGSGS 362
           L F  +  ++PL +++  A R    +     W G     + P  LH +  ++L+   +  
Sbjct: 27  LAFLTAIVLLPLVVVFWEALR----EGLAAYWQGI----QQPEALHAIRLTLLITAVAIP 78

Query: 363 LALLLGILAQEYRLHTQ---RAIPVYIIALPMLLP------QLSLLFGIQVLTLLMASQA 413
           L  L G+      +      +AI + ++ LP+ +        L LL+  Q+  L      
Sbjct: 79  LNTLFGVAIAWVLVRQSFPGQAIVLALLDLPLSISPVVAGFMLILLYSPQIGWLADLVNR 138

Query: 414 YTWWVVWAHT-------FFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWKIKLP 466
           +   +V+A         F   P V   +    Q+ +    + A+SLG + WQ FW++ LP
Sbjct: 139 WDLKIVFATPGLVLTVMFVTIPFVAREVFPVLQTLSREDEEAAQSLGATTWQTFWRVTLP 198

Query: 467 LLFPALLYAWAVGISVSLAQYLPTLMLGGGRLTTITTEAVALSSGY-DRRVTAIYALCQA 525
           ++ PALLY   +  + ++ ++    ++ G  + +  T  + +   Y + + TA +A C +
Sbjct: 199 MIRPALLYGIILSTARAIGEFGAVSVVSGKIIGSTNTLTLHVERVYLEYQATAAFA-CAS 257

Query: 526 LLPFV 530
           LL  V
Sbjct: 258 LLAIV 262