Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  316 bits (810), Expect = 1e-90
 Identities = 212/553 (38%), Positives = 302/553 (54%), Gaps = 16/553 (2%)

Query: 11  LLCVAPILPGLAGVLISASGYLPVLGHHHVSWQGFSQVWQWQGVEYALLLSVTSTLFSTY 70
           L+   PIL GLAG ++ A GYLP LG   V+   F+++     +  ++L  + + L +T 
Sbjct: 15  LILGLPILAGLAGTILPAFGYLPALGGFRVTLAHFAELAGQPHILRSVLTGLAAGLLTTV 74

Query: 71  LALLMSFAILQRFWFHPRWKRIENSLSILLALPHVAFAIGFASLFASTGWLARLLYYGFE 130
            A  +    +  F   P + RI++ +S LLA+PH A A   A L A +G+L RL+    E
Sbjct: 75  AATAVVGTFVAGFAGTPTFARIQHLVSPLLAVPHAAAAFALAFLVAPSGFLLRLI--SPE 132

Query: 131 LRDNSHEVTWLV-HDPYAIGLTIALALKEVPFILLISLPILQQLNLTKMKMLSASLGYSE 189
           +   +    WL+ +DP+A+ +   L  KEVPF+ L++L  L QL +T+   L+A+LGY  
Sbjct: 133 VTGFTRPPDWLLPNDPFALTMIAGLIAKEVPFLFLVTLAALPQLAVTRASRLAAALGYGR 192

Query: 190 PQMWWKIVFPQWLRKIRFTLFAVAAYAISVVDFSLVLGPTTPPTFSVLVWQWFNEPDLNL 249
              +   ++P   R+IR ++FAV  Y++SVVD +++LGP  PPT  V V QW  + DL  
Sbjct: 193 VAGFAVCLWPALYRQIRLSVFAVLVYSVSVVDVAMILGPKLPPTLPVRVTQWAGDDDLGA 252

Query: 250 LPRAASGAVVLLLLASIVLVAIVALEWLFTRGYRAWQSSGRSHF------PLPHKSILTL 303
              A++GA + L +    +   +ALE +          SGR              ++ T 
Sbjct: 253 RFLASAGAFLQLGVVVAAMAIWIALERIGKAVLARLTFSGRRFARDGAVRAAGALAMTTC 312

Query: 304 LFTISGAMIPLTLIWSLAQRWRFPDLFPTQWTGQFWYDEWPNVLHNMETSVLLALGSGSL 363
             TI  A + L  IWS+A  W FPD  P   T   W    P +   + T+V LAL + SL
Sbjct: 313 TVTIF-AGLSLLSIWSVAGLWPFPDALPGSLTPNTWMRILPQLWAPLGTTVALALSASSL 371

Query: 364 ALLLGILAQEYR----LHTQRAIPVYIIALPMLLPQLSLLFGIQVLTLLMASQAYTWWVV 419
           AL+  IL   YR       + A    ++ LP+L+P++S +FG+QVL L          V+
Sbjct: 372 ALVFTILLL-YRNGIASSRKNAGGYRLLYLPLLVPEISFIFGLQVLMLSAGLTPGFASVL 430

Query: 420 WAHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVG 479
             H  F  P V L+LS PW+  +  F KIA   GK   +I + ++LPLLF A L A AVG
Sbjct: 431 AVHFVFVLPYVVLSLSAPWREVDPRFEKIAAGFGKPALEILFAVRLPLLFRACLTALAVG 490

Query: 480 ISVSLAQYLPTLMLGGGRLTTITTEAVALSSGYDRRVTAIYALCQALLPFVFFSIALLLG 539
            +VS++ YLPTL++G GRLTTITTEAVALSSG DRRV  IYAL Q LLPF+ F +A  LG
Sbjct: 491 FAVSISLYLPTLLIGSGRLTTITTEAVALSSGGDRRVIGIYALVQGLLPFLAFLVA-SLG 549

Query: 540 RMQIHRYRAAQLT 552
              + R R A  T
Sbjct: 550 PQLLFRNRRAMRT 562