Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., putrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 45/221 (20%), Positives = 98/221 (44%), Gaps = 7/221 (3%)

Query: 330 FPTQWTGQFWYDEWPNVLHNMETSVLLALGSGSLALLLGILAQ----EYRLHTQRAIPVY 385
           F T+W  Q W+++   +L     ++ +AL S + A +LG LA      Y     R +   
Sbjct: 43  FSTKWYTQLWHNQ--GLLDAAWVTIRVALLSATCATVLGTLAALALVRYTRFRGRVLFSG 100

Query: 386 IIALPMLLPQLSLLFGIQVLTLLMASQAYTWWVVWAHTFFAFPLVYLALSGPWQSYNSNF 445
           ++  P+++P++     + +L + +      W +  AH  F    V + +     S++ + 
Sbjct: 101 MVYAPLVMPEVITGLSLLLLFVAIGFDRGFWTITLAHITFTMCFVAVVVQSRLLSFDQSI 160

Query: 446 SKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGISVSLAQYLPTLMLGGGRLTTITTEA 505
            + A  LG +  + F+ I LP++ PA+   W +  ++SL   + +    G   TT+  + 
Sbjct: 161 EEAALDLGATPVRTFFAITLPVIAPAVFSGWILAFTLSLDDLVISSFTTGPGATTLPMKI 220

Query: 506 VA-LSSGYDRRVTAIYALCQALLPFVFFSIALLLGRMQIHR 545
            + +  G    + AI  +   ++       +++  R ++ R
Sbjct: 221 YSQVRLGVTPEINAICTILIGIVALGVIVASIVTKRREVQR 261