Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella amazonensis SB2B

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 16/184 (8%)

Query: 330 FPTQWTGQFWYDEWPNVLHNMETSVLLALGSGSLALLLGILAQ----EYRLHTQRAIPVY 385
           F  +W  + + D+   +L  + TS+ +A  S S+A++LG +A      +R    +     
Sbjct: 42  FSAKWYVELFKDQ--QILDAVWTSLEIAFLSASMAVVLGTMAAFVMTRFRRSWAKLSLSN 99

Query: 386 IIALPMLLPQLSLLFGIQVLTLLMASQAYTWW-------VVW-AHTFFAFPLVYLALSGP 437
           +I  P+++P++  + G+ +L L +       W        +W AH+ F    V + +S  
Sbjct: 100 MITAPLVMPEV--ITGLSLLLLFVHMADLIGWPAERGRLTIWLAHSTFCAAYVAVVVSSR 157

Query: 438 WQSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGISVSLAQYLPTLMLGGGR 497
            +  + +  + A  LG +  + F+ I +P++ PAL   W +  S+SL   +      G  
Sbjct: 158 LRELDMSIEEAAMDLGATPLKTFFLITVPMIAPALTAGWLLSFSLSLDDLVIASFASGPG 217

Query: 498 LTTI 501
            TT+
Sbjct: 218 ATTL 221