Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 15/249 (6%)

Query: 303 LLFTISGAMIPLTLIWSLAQRWRFP-DLFPTQWTGQFWYDE-WPNVLHNME----TSVLL 356
           L+F ++  +  + L ++  Q   +P   F  +W   F  D  W   L N       S +L
Sbjct: 26  LVFLMAPILAIIPLSFNGGQFLTYPLQGFSLRWYAAFLTDPVWIRALRNSLIIGIVSTIL 85

Query: 357 ALGSGSLALLLGILAQEYRLHTQRAIPVYIIALPMLLPQLSLLFGIQVLTLLMASQAYTW 416
           A G G+LA L G++  ++R    + + + ++  PM++P +    G  +    +   A   
Sbjct: 86  ATGLGTLASL-GLVRAKFR---GKGLVMAVLLSPMIVPVVITAVGFYLFFAPLGLTANYP 141

Query: 417 WVVWAHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAW 476
            ++ AHT  A P V ++++   Q ++ N ++ A SLG  +   F ++ LPL+ P +    
Sbjct: 142 GLILAHTVLAAPFVVISVTATLQGFDMNLARAAASLGADQVTTFRRVILPLIAPGVASGA 201

Query: 477 AVGISVSLAQYLPTLMLGGGRLTTITTEAVALSSGYDRRVTAIYALCQALLPFVFFSIAL 536
               + S  + +  L++ G    T+  E   + SG    ++        +L  + FS  L
Sbjct: 202 LFAFATSFDEVVVVLLVAGPEQRTLPRE---MFSGIRENISPTITAVATVL--ILFSTLL 256

Query: 537 LLGRMQIHR 545
           L+    + R
Sbjct: 257 LIALEALRR 265