Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., spermidine/putrescine ABC transporter, permease protein from Marinobacter adhaerens HP15

 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 16/228 (7%)

Query: 330 FPTQWTGQFWYDEWPNVLHNMETSVLLALGSGSLALLLGILAQ----EYRLHTQRAIPVY 385
           F T W G+ + DE   +L  +  S+ +A  S S+A+ LG L       ++    R +   
Sbjct: 45  FSTHWYGELFRDE--QILSAVWMSLRIAFYSASMAVCLGTLCAFVITRFKKMRGRTLLSS 102

Query: 386 IIALPMLLPQLSLLFGIQVLTLLMASQAYTWWV------VW-AHTFFAFPLVYLALSGPW 438
           +I  P+++P++     + +L + MA Q   W V      +W AHT F    V + +S   
Sbjct: 103 MITAPLVMPEVITGLSLLLLFVQMA-QTIGWPVDRGMATIWIAHTTFCSAYVAVVVSARL 161

Query: 439 QSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGISVSLAQYLPTLMLGGGRL 498
           Q  + +  + A  LG +  + F+ I LP++ PAL+  W +  ++SL   +    + G   
Sbjct: 162 QEVDRSIEEAAMDLGCTPLKTFFVITLPVIAPALVSGWLLAFTLSLDDLVIASFVSGPGA 221

Query: 499 TTITTEAV-ALSSGYDRRVTAIYALCQALLPFVFFSIALLLGRMQIHR 545
           TT+      ++  G   ++ A+  L    +  + F IA  L R   H+
Sbjct: 222 TTLPMVVFSSVRMGVSPKINALATLIIVAVSLIAF-IAWYLMRRAEHK 268