Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., spermidine/putrescine ABC transporter permease PotC from Klebsiella michiganensis M5al

 Score = 58.2 bits (139), Expect = 4e-13
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 7/159 (4%)

Query: 330 FPTQWTGQFWYDEWPNVLHNMETSVLLALGSGSLALLLGILAQ----EYRLHTQRAIPVY 385
           F T W      ++  ++L   + S+ +A+ S + A L+G L       YR   +  +   
Sbjct: 42  FTTNWYSLLMNND--SLLQAAQHSLTMAVLSATFATLIGSLTAVALYRYRFRGKPFVSGM 99

Query: 386 IIALPMLLPQLSLLFGIQVLTLLMASQAYTWWVVWAHTFFAFPLVYLALSGPWQSYNSNF 445
           +  + M+ P + +   + VL +L+  Q   W ++++H  F  P V + +    + ++   
Sbjct: 100 LFVV-MMSPDIVMAISLLVLFMLIGIQLGFWSLLFSHITFCLPFVVVTVFSRLKGFDVRM 158

Query: 446 SKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGISVSL 484
            + A+ LG SE  I  KI LPL  PA+   W +  ++S+
Sbjct: 159 LEAAKDLGASELTILRKIILPLALPAVAAGWLLSFTLSM 197



 Score = 43.9 bits (102), Expect = 8e-09
 Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 52/247 (21%)

Query: 40  VSWQGFSQVWQ---------WQGVEYALLLSVTSTLFSTYLALLMSFAILQRFWFHPRWK 90
           ++WQGF+  W           Q  +++L ++V S  F+T +  L + A L R+ F  +  
Sbjct: 37  INWQGFTTNWYSLLMNNDSLLQAAQHSLTMAVLSATFATLIGSLTAVA-LYRYRFRGK-P 94

Query: 91  RIENSLSILLALPHVAFAIGFASLFASTGWLARLLYYGFELRDNSHEVTWLVHDPYAIGL 150
            +   L +++  P +  AI    LF   G     +  GF     SH             +
Sbjct: 95  FVSGMLFVVMMSPDIVMAISLLVLFMLIG-----IQLGFWSLLFSH-------------I 136

Query: 151 TIALALKEVPFILLISLPILQQLNLTKMKMLSAS--LGYSEPQMWWKIVFPQWLRKIRFT 208
           T  L     PF++   + +  +L    ++ML A+  LG SE  +  KI+ P         
Sbjct: 137 TFCL-----PFVV---VTVFSRLKGFDVRMLEAAKDLGASELTILRKIILP-------LA 181

Query: 209 LFAVAA-----YAISVVDFSLVLGPTTPPTFSVLVWQWFNEPDLNLLPRAASGAVVLLLL 263
           L AVAA     + +S+ D  +V    T P + +L  + ++   + + P   + A +LL+L
Sbjct: 182 LPAVAAGWLLSFTLSMDDV-VVSSFVTGPGYEILPLKIYSMVKVGVSPEVNALATILLVL 240

Query: 264 ASIVLVA 270
           + ++++A
Sbjct: 241 SLVMVIA 247