Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., Inner membrane ABC transporter permease protein YdcV from Enterobacter sp. TBS_079

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 58/270 (21%), Positives = 123/270 (45%), Gaps = 25/270 (9%)

Query: 299 SILTLLFTISGAMIPLTLIWS-----LAQRWRFPDLFPTQWTGQFWYDEWPNVLHNMETS 353
           +IL + FT   A + + +I+S     L   W     + T+W G+ ++D+   ++  +  S
Sbjct: 14  AILVIGFTFLYAPMLMLVIYSFNSSKLVTVWAG---WSTRWYGELFHDD--AMMSAVGLS 68

Query: 354 VLLALGSGSLALLLGILAQEYRLHTQRAIP----VYIIALPMLLPQLSLLFGIQVLTLLM 409
           + +A  + ++A +LG +A    +   R        ++I  P+++P +  + G+ +L L +
Sbjct: 69  LTIAALAATMASVLGTIAALVMVRFGRFRGSNGFAFMITAPLVMPDV--ITGLALLLLFV 126

Query: 410 ASQAYTWW-------VVW-AHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFW 461
           A      W        +W AH  F    V + +S   +  + +  + A  LG +  ++F+
Sbjct: 127 ALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFF 186

Query: 462 KIKLPLLFPALLYAWAVGISVSLAQYLPTLMLGGGRLTTITTEAV-ALSSGYDRRVTAIY 520
            I LP++ PA++  W +  ++SL   +    + G   TT+      ++  G +  + A+ 
Sbjct: 187 IITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 246

Query: 521 ALCQALLPFVFFSIALLLGRMQIHRYRAAQ 550
           ++   ++  V F    L+ R +  R R  Q
Sbjct: 247 SIILGVVGIVGFIAWYLMARAEKQRVRDIQ 276