Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., polyamine ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 51.2 bits (121), Expect = 5e-11
 Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 16/178 (8%)

Query: 330 FPTQWTGQFWYDEWPNVLHNME------TSVLLALGSGSLALLLGILA----QEYRLHTQ 379
           + T W+G F  D +  +L N         S+ +A  S +LA LLG LA      YR   +
Sbjct: 35  YSTAWSG-FTLDWYAKLLANTPLVDAALNSLSVATLSATLATLLGSLAAMCLHRYRFPGR 93

Query: 380 RAIPVYIIALPMLLPQLSLLFGIQVLTLLMASQAYTWWVVW--AHTFFAFPLVYLALSGP 437
           + +   I  L +      ++ GI +L   +A +    +V    AHT    P V + +   
Sbjct: 94  KVLHSSIYVLTV---SPDIVMGISLLIFFIALRMELGFVTLLIAHTTLGLPFVTVTVLAR 150

Query: 438 WQSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGISVSLAQYLPTLMLGG 495
              ++ +  + AR LG SE   +  I LPL  PA+   W +  ++S+   L +  + G
Sbjct: 151 LAEFDEHLVEAARDLGASEAAAYRHIILPLTLPAVAAGWLLSFTLSMDDVLISFFVTG 208