Pairwise Alignments

Query, 382 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., putative ABC transporter solute-binding protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  217 bits (552), Expect = 6e-61
 Identities = 132/370 (35%), Positives = 195/370 (52%), Gaps = 23/370 (6%)

Query: 22  WEETTEKARGQTVYFHAWGGSQEINSYLR-WSADLLKSRYGVTLQHVKVTDIAETTTRLI 80
           W E    ARG TV FH +GG    N Y+  + A  L  RYG+TL  V + +      RL+
Sbjct: 59  WAEVEAAARGTTVRFHMYGGMATANRYVDGFVAPELARRYGITLVRVPM-EAPVFVNRLL 117

Query: 81  AEKAAGKNEQGSVDLVWINGENFKSMKNNQLLYGPFVEDLPNWPKVDKSLPVDS--DFSE 138
           AEKAAG+   GS+DL+WINGENF++ +   +L+GP+   LPN    D   PV S  DF  
Sbjct: 118 AEKAAGR-ATGSMDLLWINGENFRNARLGGVLWGPYAPALPNMALTD---PVQSATDFGY 173

Query: 139 PTEGLEAPWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNRISYPQPPEFHGTSFLKA 198
           P +G E+P+G  QLV  +D  +   PP + A+L  + +A P R +YPQPP+F G++F++ 
Sbjct: 174 PVDGHESPYGRAQLVLEYDTARTPEPPRTMAQLGQWVKAHPGRFTYPQPPDFTGSAFIRQ 233

Query: 199 ALIELTHYAPELNQAVEPATFEQLTQPLWQYLDELHAVAWRKGKQFPAGSAQMMQLLDDG 258
           A   LT    +  + ++     +    LW +L +L    W+ G+ +P  +A +  L   G
Sbjct: 234 AFYALTGGHAQYMRPLDKELLGRKAPALWTWLRDLAPHLWQAGRAYPRDAAALDALFARG 293

Query: 259 QLDLAITFNPNAVFSAQATGKLAPTAQSYAMKKGALTNIHFLAIPWNANAKEGALVAINF 318
           ++D +++++P    +    G    T ++ A+  G++ N HF+AIP+NA  K GA+VA NF
Sbjct: 294 EVDFSVSYHPAHAQALIDDGTYPATVRTVALDDGSIFNTHFVAIPFNAPNKAGAMVAANF 353

Query: 319 LLSDEAQSRKGDLSIWGD---------PSILKPQFLTGSAKNTILFP------AIAEPHP 363
           LLS EAQ  K D + WGD         P   + +F         L P      A+ E   
Sbjct: 354 LLSPEAQLAKMDPAWWGDFPAIEVGRLPEEWRARFAAVKMGEATLPPDELARRAVPEIPA 413

Query: 364 SWQSALEAEW 373
            W  ALE  W
Sbjct: 414 DWLEALERGW 423