Pairwise Alignments

Query, 382 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., extracellular solute-binding protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  235 bits (600), Expect = 2e-66
 Identities = 135/376 (35%), Positives = 206/376 (54%), Gaps = 19/376 (5%)

Query: 16  GVSAQSWEETTEKARGQTVYFHAWGGSQEINSYL-RWSADLLKSRYGVTLQHVKVTDIAE 74
           G    +W +  + ARG TV    +GG   +N ++  W A  L+ R+G+ L+ V + D A 
Sbjct: 84  GFENTTWTDIEKSARGTTVRMFMYGGFAHVNRWMDAWVAPRLQERHGIRLERVPM-DAAV 142

Query: 75  TTTRLIAEKAAGKNEQGSVDLVWINGENFKSMKNNQLLYGPFVEDLPNWPKVDKSLPVDS 134
              RL+AEK AG+ + G++DL+WINGENF++ +   LL+GPF   LP+   V+     D 
Sbjct: 143 FVNRLLAEKQAGR-DTGTMDLLWINGENFRNAREAGLLWGPFSGALPSSALVEAGHR-DM 200

Query: 135 DFSEPTEGLEAPWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNRISYPQPPEFHGTS 194
           DF  P EG E+PWG  QLV  +D  +   PP S  EL ++ +A P R +YPQPP+F G++
Sbjct: 201 DFGYPVEGYESPWGSAQLVLEYDTARTPEPPRSVEELAAWIKAHPGRFTYPQPPDFTGSA 260

Query: 195 FLKAALIELTHYAPELNQAVEPATFEQLTQPLWQYLDELHAVAWRKGKQFPAGSAQMMQL 254
           F++  L   T    +   A + A F+  T  LW +L+ L    W++G+ +P  +A    L
Sbjct: 261 FVRQLLYAATGGHEQYMGAFDKALFDTKTPQLWAFLNGLKPYLWQEGRAYPRDAAMQDSL 320

Query: 255 LDDGQLDLAITFNPNAVFSAQATGKLAPTAQSYAMKKGALTNIHFLAIPWNANAKEGALV 314
              G++D +I+++P    +    G   PT ++  +++G++ N HF+AIP+NA  + GA+V
Sbjct: 321 FARGEVDFSISYHPVHAQANIGEGTYPPTVRTLVLREGSIRNTHFVAIPFNAPNRAGAMV 380

Query: 315 AINFLLSDEAQSRKGDLSIWGDPSILKPQFLTGSAK---------NTILFP------AIA 359
             NFLLS EAQ+ K D + WGD  +L  + LT   +            L P      A+ 
Sbjct: 381 VANFLLSPEAQTAKLDPANWGDFPVLDVRRLTEDQRARLAAVDLGKATLSPEILAGAALP 440

Query: 360 EPHPSWQSALEAEWQK 375
           E   SW  ALE  WQ+
Sbjct: 441 EIPASWLEALEKGWQE 456