Pairwise Alignments

Query, 147 a.a., heat-shock protein HslJ from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 59.3 bits (142), Expect = 5e-14
 Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 13/153 (8%)

Query: 4   SSKSLLAAITLPVLMTACASNGDAVQITA----QDLQHHNWQLT---QIDGKDV--VKSE 54
           SS S    ++L  L+    +    ++++A      L+   W+L    Q++G+ +  V  E
Sbjct: 6   SSLSSTLGLSLSALVFGATAIAQPLRLSAAPEPSKLEDITWELISFRQVNGEQLAAVAPE 65

Query: 55  HEQAPRLEIGEQM-MASGNAGCNNFFG--KAELKDNQFRIEKMGMTMKMCIGDAM-DTEQ 110
            + + RL+ G+      GN GCN+FFG  + E   NQ +I+ +G T++ C+  A+   EQ
Sbjct: 66  QKASLRLQSGQTTPQLQGNTGCNSFFGSYRLESNTNQLQIKPVGSTLRACLSTALSQQEQ 125

Query: 111 AVSQTLTDWSQITLTKETLTLKNDVHTLTFTLR 143
           A+   L   +   L  E L L+N    + FTLR
Sbjct: 126 ALLTGLAQVTTYRLEGERLQLQNSAQQVLFTLR 158



 Score = 33.1 bits (74), Expect = 4e-06
 Identities = 19/62 (30%), Positives = 26/62 (41%)

Query: 70  SGNAGCNNFFGKAELKDNQFRIEKMGMTMKMCIGDAMDTEQAVSQTLTDWSQITLTKETL 129
           SG  GCN +F   +++  Q  +  +G T   C  D    EQA  Q L       L  + L
Sbjct: 203 SGFTGCNRYFATYKVQQQQLTVGAIGSTRMACGRDQATQEQAFLQLLAASHSYQLEGDRL 262

Query: 130 TL 131
            L
Sbjct: 263 EL 264