Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., ABC transporter permease from Rhodanobacter denitrificans FW104-10B01

 Score =  176 bits (447), Expect = 7e-49
 Identities = 115/368 (31%), Positives = 189/368 (51%), Gaps = 9/368 (2%)

Query: 3   SLFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSF 62
           S  R++A  VKE   + RD  +  +V + P++QLL+F FA   +VRN+ I V +Q    +
Sbjct: 7   SFTRLRAQFVKEILSILRDPRSRMVVFVPPILQLLVFAFAATLEVRNVDIAVYNQDAGRW 66

Query: 63  SRLLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDL---VARSQQQRELGQ 119
           S  LV+ +   + I   +H  +  +  + I  G + AAL +P+D    +A     R   Q
Sbjct: 67  SHELVQRMDSARFITHVRHVDSQRQLHELIDRGQVIAALAIPADFSRTIAAGGSGR--AQ 124

Query: 120 WLIDG---SDTMIAGALLGLKNMPLTDLPTLGIQPLTPTFEITLLYNPSRRSAVNIVPGL 176
            L+DG   +   I  A L      +      G Q   P   +   +NP+      IVPGL
Sbjct: 125 VLVDGRRSNSGQITVAYLSTIAAEVGAAVVPGTQASNPVV-VRHWFNPNLVYRWFIVPGL 183

Query: 177 LGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIILG 236
            G++   + +L TS +I RERE G  + L+ +P  + E++I K +P + +G +    ++ 
Sbjct: 184 TGILALFSALLITSLSIARERELGTFDQLLVSPTSTPEIIISKSLPALAIGTLLGLFMIS 243

Query: 237 LGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLPSILLS 296
            G F+F +P  G+   +L   +LFI + + +GL+IS ++ TQ QA+     I +P++L+S
Sbjct: 244 AGVFLFGIPFTGSFGLLLASLVLFILSVVGIGLMISAVSATQQQAILGAFAIGVPAVLMS 303

Query: 297 GFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGLMLA 356
           GF  P E MP A QWL++ +P THF+ ++ G  L+     D+  +   LA+  L  L LA
Sbjct: 304 GFATPVENMPVALQWLAQAIPLTHFLVIVEGTFLKTMPALDILANLWPLAVIALVTLTLA 363

Query: 357 ALRFKKSL 364
               +  L
Sbjct: 364 TALVRSRL 371