Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  152 bits (383), Expect = 2e-41
 Identities = 104/364 (28%), Positives = 179/364 (49%), Gaps = 19/364 (5%)

Query: 6   RIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRL 65
           R  A++ KE  Q+ RD  +  +  ++PL+ L LFG+ ++ D     + +V +  +  +R 
Sbjct: 19  RFAALVRKESYQVIRDPSSILIAFVLPLVLLFLFGYGVSLDTTRTRVALVVEEATPLTRD 78

Query: 66  LVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQRELG-QWLIDG 124
           L  S + ++   V        E E  +  G +R  L++P+   A     R    Q ++DG
Sbjct: 79  LAASFEASRYFSVATGR-DRREFEDDLVLGRVRGILVIPAGFAAEHAAGRHPSVQVIVDG 137

Query: 125 SDTMIA--------GALLGLKNMPLTDLPTLGIQPLTPTFEITLLYNPSRRSAVNIVPGL 176
           SD   A        GA+   +   L++  +    P     E    +NP   S   +VPG 
Sbjct: 138 SDPNTANFVQNYAQGAVANWERQRLSEGRS---PPPAIAAEQRFWFNPQLTSRNFLVPGS 194

Query: 177 LGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIILG 236
           + +++T+   L TS  + RE ERG +E ++ TPV + EL+ GK++PY  +GL  + + + 
Sbjct: 195 IAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVSAAELLAGKLLPYFVLGLTSMTLCVL 254

Query: 237 LGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMT-VFILLPSILL 295
           +  F+F VP  G+++ +   +  F+  +L  GL+IS     Q  A Q+  +   LP+ LL
Sbjct: 255 VAVFLFDVPFRGSVAALYALSATFLMPALGQGLLISAATKNQFLASQLALISAFLPAFLL 314

Query: 296 SGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLW-RDTLWLALFTLFGLM 354
           SGF+F    MPT  QW++  +PA + +  ++ + L G    D+W      +A+  L G M
Sbjct: 315 SGFLFEINSMPTVIQWVTYAVPARYLIPSLQTVFLAG----DIWPMFARAIAVMFLIGCM 370

Query: 355 LAAL 358
             AL
Sbjct: 371 FFAL 374