Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  155 bits (391), Expect = 2e-42
 Identities = 101/367 (27%), Positives = 196/367 (53%), Gaps = 8/367 (2%)

Query: 6   RIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRL 65
           R+KA++VKE   + RD     +++  P+IQLL+F +A   +V N+ + V+++ +  +S+ 
Sbjct: 5   RLKALIVKELLAVLRDPKGRTVLIGPPIIQLLVFSYAATLEVTNVDLMVLNRDNGHWSQE 64

Query: 66  LVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQRELG-QWLIDG 124
           LV+ V  +   R  +   + +E   AI +  + A + +        +  R    Q ++DG
Sbjct: 65  LVQQVGGSPTFRSIELASSPHEVRLAIDTQRVLAVVEIGPTFSRDIEAGRPAEVQMILDG 124

Query: 125 ----SDTMIAGALLGLKNMPLTDLPTLGIQPLTPTFEITLL--YNPSRRSAVNIVPGLLG 178
               +  +++G L  +      + P  G +  + T  +     +NP+      +VP L+ 
Sbjct: 125 RRSNASQIVSGYLGRIVGAVAAETPA-GKRAASETIRVEARNWFNPNLTYQWFMVPNLVA 183

Query: 179 VILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIILGLG 238
            I  +  ++ T+ ++ RERE G  + LI +P+ + E+++GK++P + +GL  + I +   
Sbjct: 184 SIALLIGLIVTALSVARERELGTFDQLIVSPLRTHEILLGKLIPPMMIGLFHITIYILAA 243

Query: 239 HFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLPSILLSGF 298
            FIF VP+ G+L  +    + +++A + LGL IS ++ TQ QA+      ++P++LLSGF
Sbjct: 244 VFIFGVPLRGSLFLLYGSAIFYLAAVVGLGLFISALSMTQQQAILGAFLFMVPAMLLSGF 303

Query: 299 MFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGLMLAAL 358
             P E MP+  Q ++ + P  +F+ +++G+ L+   LA++   TL L L  +  L  AA 
Sbjct: 304 ATPIENMPSWLQPVTLINPLRYFLVIVKGVFLKDIPLAEVVHQTLPLCLIAIVTLSSAAW 363

Query: 359 RFKKSLD 365
            F++ L+
Sbjct: 364 LFRRRLE 370