Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., ABC-type multidrug transport system, permease component from Dechlorosoma suillum PS

 Score =  270 bits (690), Expect = 5e-77
 Identities = 163/374 (43%), Positives = 226/374 (60%), Gaps = 16/374 (4%)

Query: 3   SLFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSF 62
           SL R   +L+KEF QL RDR+TFGM+V IP+IQLLLFGFAIN+D +++P  +V      F
Sbjct: 9   SLSRWFGILLKEFIQLKRDRLTFGMIVGIPIIQLLLFGFAINSDPKHLPTAIVMADPGPF 68

Query: 63  SRLLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPS----DLVARSQQQRELG 118
           +R  V +++ +   ++    +   EA   +    ++  +  P     DLV R +    L 
Sbjct: 69  ARSYVAAMQNSDYFKIVGS-VDEKEANALLDRSQVQFVVTFPPGFHRDLV-RGKAPTLLV 126

Query: 119 QWLIDGSDTMIAGALLGLKN-----MPLTDLPTLGIQPLTPTFEITL--LYNPSRRSAVN 171
           +   D +D M AG  + + N     +   DLP L  +  TP  ++ +   YNP   ++ N
Sbjct: 127 E--ADATDPMAAGGAISVLNKLGLEVFAPDLPGLE-KTATPPLDLRVHRRYNPEGLTSYN 183

Query: 172 IVPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQV 231
           +VPGLLGVILTMTM+L T  A+ RERERG  E L+ TP   +E+M GKIVPYI +GLIQV
Sbjct: 184 VVPGLLGVILTMTMVLMTGLAMTRERERGTFENLLATPATPVEVMTGKIVPYILIGLIQV 243

Query: 232 AIILGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLP 291
            +IL    FIF VP++G L  +    LLFI A+LTLG+  S+IA  QLQAMQMT F  LP
Sbjct: 244 TLILLAARFIFDVPMHGNLLLLYAVVLLFICANLTLGITFSSIARNQLQAMQMTFFFFLP 303

Query: 292 SILLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLF 351
           S+LLSGFMFP+ GMP  AQ +  +LP THF+ L+RGI+L+G  +  +W     +  F   
Sbjct: 304 SMLLSGFMFPFRGMPEWAQVVGNVLPLTHFLVLVRGILLKGNGIDMVWSSVWPILAFIAV 363

Query: 352 GLMLAALRFKKSLD 365
            L +    F+++LD
Sbjct: 364 VLGIGLRTFRRTLD 377