Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 918 a.a., ABC-type multidrug transport system, ATPase component from Dechlorosoma suillum PS

 Score =  149 bits (377), Expect = 2e-40
 Identities = 103/368 (27%), Positives = 177/368 (48%), Gaps = 16/368 (4%)

Query: 3   SLFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSF 62
           SL R+     +E  +L RD I     ++  ++ + + G+ I+ DV  +   V+D+  S  
Sbjct: 546 SLRRLLGYAYREALELRRDTIRLTFALLGSVLLMFVLGYGISMDVEGLRFAVLDRDQSPE 605

Query: 63  SRLLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQR--ELGQW 120
           SR  ++++  ++    +       E E+ +  G++  AL +P +      Q R  E+G W
Sbjct: 606 SRDYIDNIAGSRYFLQQPPIADSAELERRMRDGELTVALEIPPNFGRDLHQGRSPEVGAW 665

Query: 121 LIDGS----DTMIAGALLGLKNMPLTDLPT--LGIQPLTPTFEITLLY--NPSRRSAVNI 172
            +DG+         G + GL    +  L T   G  P     ++ L Y  N   RS   +
Sbjct: 666 -VDGAMPYRGETTRGYVQGLHQQYIVKLVTEATGTAPTLTWTDVALRYRYNQDFRSIYAM 724

Query: 173 VPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVA 232
           VP ++ ++L     +  +  +VRE+E G++  L  TPV  +E +IGK +PY+ V ++   
Sbjct: 725 VPAVIPLLLVFIPAILMALGVVREKELGSITNLYVTPVSRLEFLIGKQLPYVVVSMLSFF 784

Query: 233 IILGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMT-VFILLP 291
            +      +F VPI G+   +  G LL++  +  LGL+IST   TQ+ A+  T +  +LP
Sbjct: 785 ALALQAVLVFGVPIKGSFLALACGALLYVVCTTGLGLLISTFTKTQIAALFGTAILTMLP 844

Query: 292 SILLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALF--- 348
           ++  SG   P   +   A W+ +  PAT+F+ + RG+  +    ADL +  L LA F   
Sbjct: 845 TVQFSGLTTPVASLVGGAYWIGQFFPATYFLVISRGVFTKALGFADLGQQFLALACFIPV 904

Query: 349 -TLFGLML 355
            TL  L L
Sbjct: 905 LTLISLAL 912