Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., Probable conserved integral membrane protein ABC transporter from Mycobacterium tuberculosis H37Rv

 Score = 82.8 bits (203), Expect = 8e-21
 Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 13/222 (5%)

Query: 152 LTPTFEITLLY-----------NPSRRSAVNIVPGLLGVILTMTMILFTSAAIVRERERG 200
           L P   ITL+Y            PS  +   +V  LLG+     M + T+  + RER  G
Sbjct: 4   LVPILIITLMYFMFENVPHRPGTPSGFNTACLV--LLGLFPLFVMFVITAITMQRERASG 61

Query: 201 NLELLITTPVHSIELMIGKIVPYIFVGLIQVAIILGLGHFIFAVPINGALSQILFGTLLF 260
            LE ++TTP+  ++L+ G    +      Q  +   +  +       G+   +    ++ 
Sbjct: 62  TLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIVN 121

Query: 261 ISASLTLGLVISTIANTQLQAMQMTVFILLPSILLSGFMFPYEGMPTAAQWLSELLPATH 320
               + LGL+ S  A T+ QA+Q    +++P +LL+G + P   MPT  +W+S ++PA++
Sbjct: 122 AVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPASY 181

Query: 321 FMRLIRGIVLRGADLADLWRDTLWLALFTLFGLMLAALRFKK 362
            +  ++ +           RD + +  F +  L LAA+  ++
Sbjct: 182 ALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRR 223