Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 1106 a.a., ABC transporter related (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  152 bits (385), Expect = 3e-41
 Identities = 111/397 (27%), Positives = 196/397 (49%), Gaps = 41/397 (10%)

Query: 4    LFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVD-----QS 58
            L R++ +L KE+ Q+ RD     + +++P++ L LFG+ I+ D R++P+ +V      ++
Sbjct: 716  LLRMRGLLRKEWLQVVRDPSAIAIALVMPVVLLFLFGYGISLDARDVPVAIVTDDLGPEA 775

Query: 59   DSSFSRLLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQR--- 115
                +RLL+      +V+        +  AE+ + +G + A + L SD   R        
Sbjct: 776  MEFAARLLLADTFRPRVVT------DMRRAEEDLRAGRVDAIVHLQSDFARRLSDATGGA 829

Query: 116  ------------------ELG----QWLIDGSDT----MIAGALLGLKNMPLTDLPTLGI 149
                              + G    Q +++G D      ++G +  +    L+       
Sbjct: 830  TGGAAGGTARPDGAPPAGDAGTVPVQLIVNGVDPNNARTVSGYVTSVWQSWLSGRVAAAG 889

Query: 150  QPLTPTFEITLLYNPSRRSAVNIVPGLLGVILTMTMILFTSAAIVRERERGNLELLITTP 209
            Q         + +NP+  S   +VPGL+ +I+T+T  L T+  + RE ERG +E L+ TP
Sbjct: 890  QVPAVRMATRMWFNPTADSRHFLVPGLMVLIMTLTGALLTAMVMAREWERGTMEALLVTP 949

Query: 210  VHSIELMIGKIVPYIFVGLIQVAIILGLGHFIFAVPINGALSQILFGTLLFISASLTLGL 269
            V   EL+ GK++PY  +G+  + + + +  ++F VP+ G+L+ +   + LF++A+L +GL
Sbjct: 950  VRMGELLTGKLLPYFVLGMGGMVLTVIMALYLFGVPLRGSLAVLAGASSLFLTAALGMGL 1009

Query: 270  VISTIANTQLQAMQMTVF-ILLPSILLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGI 328
             IS +A  Q  A Q  +    LP++ LSGF+F  E  P   Q +S ++ A +F  L++ I
Sbjct: 1010 FISVLARNQFIAGQAALLATFLPALFLSGFIFDLESTPGFVQAVSYVIAARYFATLLKTI 1069

Query: 329  VLRGADLADLWRDTLWLALFTLFGLMLAALRFKKSLD 365
             L G     +  + L LA    F L +A LR +K LD
Sbjct: 1070 FLAGEVWEVIVPNALALAALAFFFLTVARLRCRKRLD 1106