Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., membrane protein from Klebsiella michiganensis M5al

 Score =  116 bits (290), Expect = 1e-30
 Identities = 98/380 (25%), Positives = 173/380 (45%), Gaps = 26/380 (6%)

Query: 1   MNSLFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDS 60
           M  L  I  + +KE R L  D+    ++V    + +      +   +   PI + D   S
Sbjct: 1   MRGLRNIYNLGMKELRSLLGDKAMLTLIVFAFTVSVYSSATVMPGSLHLAPIAIADMDKS 60

Query: 61  SFSRLLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLV--ARSQQQRELG 118
             S  ++        +      +T +E +  + +G    A+ +P D      + +Q EL 
Sbjct: 61  QLSSRIINGFYRPWFL--PPALITADEMDAGLDAGRYTFAINIPPDFQRDVLAGRQPEL- 117

Query: 119 QWLIDGS--------DTMIAGALLGLKNMPLTDLPTLGIQPLTPTFEITLLYNPS-RRSA 169
           Q  +D +        ++ I   + G  N  +T     G  P+     + + +NP+  +  
Sbjct: 118 QVNVDATRMSQAFTGNSYIQNIVTGEVNSFVTRYRDNGSLPVE--LAVRMRFNPNLEQER 175

Query: 170 VNIVPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKI-----VPYI 224
              V  ++  I TM  I+ T +A++RERE G +E L+  PV   E+M+ KI     V  +
Sbjct: 176 FGAVMAIINNI-TMLAIVLTGSALIREREHGTVEHLLVMPVTPFEIMMAKIWSMGLVVLV 234

Query: 225 FVGLIQVAIILGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQM 284
             GL  + ++ G    +  VPI G++   + G  L + A+ ++G+ + T+A +  Q   +
Sbjct: 235 VSGLSLILMVQG----VLQVPIEGSIPLFMLGVALSLFATTSIGIFMGTVARSMPQLGLL 290

Query: 285 TVFILLPSILLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLW 344
            + +LLP  +LSG   P E MP A Q +   +P THF+ L + I+ RGAD + +W   L 
Sbjct: 291 MILVLLPLQMLSGGSTPRESMPQAVQDIMLTMPTTHFVSLAQAILYRGADFSIVWPQFLT 350

Query: 345 LALFTLFGLMLAALRFKKSL 364
           L         +A LRF+K++
Sbjct: 351 LLAIGGVFFTVALLRFRKTI 370