Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., ABC transporter permease from Dyella japonica UNC79MFTsu3.2

 Score =  364 bits (935), Expect = e-105
 Identities = 191/365 (52%), Positives = 250/365 (68%), Gaps = 5/365 (1%)

Query: 6   RIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRL 65
           R+ A+++KE RQ+SRDRIT  M+V IP+IQL+LFG+AINT++R +  G+ DQ++S+ SR 
Sbjct: 5   RLWAIVLKELRQMSRDRITLAMIVGIPVIQLVLFGYAINTNLRGLDAGIADQANSAGSRA 64

Query: 66  LVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQRELGQWLIDGS 125
           LV  +  T VI    H  T  E    +  G I   +++P D   R    R++ Q ++DGS
Sbjct: 65  LVMDMLATGVIAPVAHADTPEELVAMLRRGQISIGVVVPPDFERRRYDGRQVAQIMVDGS 124

Query: 126 DTMIAGALLGLKNMPLTDLPTLGIQPLTPT-----FEITLLYNPSRRSAVNIVPGLLGVI 180
           D ++  A   L  +P+         PL  T       I   YNP RRSAVNIVPGL+GVI
Sbjct: 125 DNVVQSAAAQLAQVPVDGSAPDTRAPLVSTPAAGPISIVSFYNPQRRSAVNIVPGLIGVI 184

Query: 181 LTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIILGLGHF 240
           LTMTM+LFT  AIVRERERGN+ELLI TP+ S ELM+GK++PYI +GL+QV +IL LG +
Sbjct: 185 LTMTMVLFTGIAIVRERERGNMELLIATPLTSAELMVGKVLPYIGIGLLQVTVILALGRW 244

Query: 241 IFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLPSILLSGFMF 300
           +F VPI+G+L  +     L I A+LT+GL+IST A +Q QAMQMT F+ LPSILLSGFMF
Sbjct: 245 LFTVPIHGSLLDVYLAAGLLILANLTMGLLISTRAQSQFQAMQMTFFVFLPSILLSGFMF 304

Query: 301 PYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGLMLAALRF 360
           P+ GMP AAQWL+E+LP THF+RLIRG++LRGA L +LWR+   L  FT   +  A LRF
Sbjct: 305 PFAGMPQAAQWLAEILPLTHFLRLIRGVMLRGASLWELWREVAALVAFTAVMMTAAILRF 364

Query: 361 KKSLD 365
           +K LD
Sbjct: 365 RKRLD 369