Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 907 a.a., ABC-type multidrug transport system, permease component from Pseudomonas fluorescens FW300-N2E2

 Score =  192 bits (487), Expect = 3e-53
 Identities = 93/232 (40%), Positives = 147/232 (63%), Gaps = 1/232 (0%)

Query: 2   SDYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQ 61
           +D AI A ++  +FG FTA++ ++  + RG I+GFLG NGCGK+TT++VLTGL+  + G 
Sbjct: 268 ADIAIEAHDLTLRFGDFTAVDKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLIPASEGS 327

Query: 62  IKVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQL 121
            ++LG  +  +    R ++G+M+Q FSLY +L+ ++NL+   ++F +  +  +QR    +
Sbjct: 328 ARLLGNPVNAKDLATRKRVGFMSQSFSLYGELSARQNLELHAKLFDLPTTDSRQRIDELI 387

Query: 122 KTYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFD 181
           + + L     Q    +  G +QRL+LA A +H PE+L LDE TS VDP  R +FW  L +
Sbjct: 388 QRFNLQALADQPSGALPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLIE 447

Query: 182 LS-AQGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVE 232
           LS  QG TI ++TH+M+EA+RC R+++M AG++ A D P  L  Q     +E
Sbjct: 448 LSREQGVTIFLSTHFMNEAQRCDRISLMHAGKVLACDTPAALQAQFNGQTLE 499



 Score =  137 bits (346), Expect = 7e-37
 Identities = 77/217 (35%), Positives = 124/217 (57%), Gaps = 6/217 (2%)

Query: 5   AIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIKV 64
           A+ A  +  ++G   A+ +I   +  G+  G +GP+G GKS+ + ++ G+ +   GQ+ V
Sbjct: 8   ALRASGLEHRYGQQVALSDIAFSLPAGTRCGLIGPDGAGKSSLLGLIAGVKKLQHGQLDV 67

Query: 65  LGLSIP--KQSELLRLKIGYMTQKF--SLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQ 120
           LG SI   +    L  +I +M Q    +LY DL+++EN++F G +FG++R+  +QR    
Sbjct: 68  LGASIDDRRHRNTLYRRIAFMPQGLGGNLYPDLSIRENIRFFGTLFGLSRADCEQRMGTL 127

Query: 121 LKTYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLF 180
           L    L     +    +SGG KQ+L L  A +H P+LL LDE T+ VDP +RR FWE + 
Sbjct: 128 LLATDLQRFADRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRFWELIE 187

Query: 181 DLSAQ--GTTILVTTHYMDEAERCHRLAIMEAGEIRA 215
           D+  Q    T+LV T YM+EAE+     +++ G + A
Sbjct: 188 DVRRQRPQLTLLVATAYMEEAEQFEHCLMLDNGRLIA 224