Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., putative ABC-type multidrug transport system, ATPase component (RefSeq) from Shewanella amazonensis SB2B

 Score =  350 bits (898), Expect = e-101
 Identities = 180/301 (59%), Positives = 222/301 (73%), Gaps = 3/301 (0%)

Query: 5   AIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIKV 64
           AI    + +QFG   A++ ++L + RGSIYGFLGPNGCGKST+IR+LTGLL+PT+G+I+V
Sbjct: 16  AIETRGMTRQFGALKAVDGVDLAIPRGSIYGFLGPNGCGKSTSIRMLTGLLKPTSGEIRV 75

Query: 65  LGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLKTY 124
           LG  +    E LR +IGYMTQKFSLY++LTV ENL+F+ +I+G+  +  + R +  L  Y
Sbjct: 76  LGEPLKGAEEKLRRRIGYMTQKFSLYENLTVLENLRFVARIYGLQGNKAKDRIEQLLSLY 135

Query: 125 GLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDLSA 184
            L+ R  Q    MSGGQKQRLALAAAT+H PELLFLDE TSAVDPENRREFWE+LFDLSA
Sbjct: 136 SLEGRESQMAGSMSGGQKQRLALAAATIHEPELLFLDEPTSAVDPENRREFWERLFDLSA 195

Query: 185 QGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVEIKAPALRSLKEK 244
           +G TILV+THYMDEAERCH LAI+E G  RAD  P+ LMQ MG  VVEI    LR LK++
Sbjct: 196 KGCTILVSTHYMDEAERCHGLAILERGIKRADGSPKALMQAMGARVVEIGGQDLRVLKQQ 255

Query: 245 LLNFSQVRSAAQLGIRLRVLVHRDVIDPILWLRHTFPQLAAAELTLARPSLEDVFVTVTG 304
           LL  + V SAAQ+G RLRVL+   + DPI WL     ++   E+   RPSLEDVFVT TG
Sbjct: 256 LLAEAPVLSAAQIGSRLRVLIRSQIDDPIAWLGQ---RVGTREMDEVRPSLEDVFVTCTG 312

Query: 305 K 305
           +
Sbjct: 313 Q 313