Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 580 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  189 bits (479), Expect = 2e-52
 Identities = 98/217 (45%), Positives = 133/217 (61%)

Query: 6   IHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIKVL 65
           I A  + K+FG FTA ++I   + RG I+G LGPNG GKSTT ++L GLL+PTAG+ +V 
Sbjct: 333 IEAHGLTKRFGDFTAADDITFAIPRGQIFGLLGPNGAGKSTTFKMLCGLLKPTAGEGRVS 392

Query: 66  GLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLKTYG 125
           G  + ++S   R ++GYM QKFSLY DL+V +NL+F   ++G+  +   +R     + + 
Sbjct: 393 GYDLRRESAQARNQLGYMAQKFSLYGDLSVAQNLEFFAGVYGLAGAHKTERIALLGEVFD 452

Query: 126 LDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDLSAQ 185
                      +  G KQRLALA A +H P  LFLDE TS VDP  RREFW  +  L  +
Sbjct: 453 FGPYGAMSAKDLPLGIKQRLALACAVIHEPAALFLDEPTSGVDPITRREFWTHINALVEK 512

Query: 186 GTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKL 222
           G T+LVTTH+MDEAE C R+A++  G   A   P  L
Sbjct: 513 GITVLVTTHFMDEAEYCDRIALIYHGRSIALGSPGAL 549



 Score =  160 bits (405), Expect = 7e-44
 Identities = 107/314 (34%), Positives = 170/314 (54%), Gaps = 12/314 (3%)

Query: 1   MSDYAIHAENVVKQFGHFT-AIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTA 59
           MS+  I   +V K+FG    A+++++ +V  G I G +GP+G GK+T +R++TGL+ P +
Sbjct: 1   MSEDCIRLSDVSKRFGSAAPALDHLSGRVGGGEITGLVGPDGAGKTTLLRLMTGLMVPDS 60

Query: 60  GQIKVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQ- 118
           G I+VLG    ++   L+ +IGYM Q+F LY+DL+VQENL     + G+    L  R   
Sbjct: 61  GSIEVLGFDTRREPAGLQAQIGYMPQRFGLYEDLSVQENLDLYADMRGL---ALVDRPAA 117

Query: 119 -AQLKTYGLDERRKQRVSG-MSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFW 176
            A+L  +    R   R++G +SGG KQ+L LA A +  P LL LDE    VDP +RR+ W
Sbjct: 118 FAELLRFTDLARFTGRLAGKLSGGMKQKLGLACALLKKPRLLLLDEPGVGVDPISRRDLW 177

Query: 177 EQLFDLSAQGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVEIK-- 234
             + DL+  GT ++ +T Y++EAE C R+ ++  G++     P  + +++   V +I   
Sbjct: 178 AMVRDLTKDGTGVVWSTAYLEEAEACDRVLLLNGGKLLFAGPPADMRERVTGRVFKITGI 237

Query: 235 APALRSLKEKLLNFSQVRSAAQLGIRLRVLVHRDVIDPILWLRHTFPQLAAAELTL--AR 292
           +   R +  +LL  S+V      G  +R++V      P   +      L A  L+     
Sbjct: 238 SGRRRPILARLLERSEVMDGVIQGEAMRIVVGPG-DRPAALIDRAIAGLDAGALSAKPTS 296

Query: 293 PSLEDVFVTVTGKG 306
           P  ED FV + G G
Sbjct: 297 PRFEDAFVDMLGGG 310