Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 904 a.a., ribosome-associated ATPase/putative transporter RbbA from Rhodopseudomonas palustris CGA009

 Score =  207 bits (528), Expect = 6e-58
 Identities = 101/230 (43%), Positives = 149/230 (64%), Gaps = 1/230 (0%)

Query: 4   YAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIK 63
           YAI AEN+  +FG FTA++++N +++RG I+GFLG NGCGKSTT+++LTGLL PT G+ +
Sbjct: 268 YAIEAENLTCRFGDFTAVDHVNFQIKRGEIFGFLGSNGCGKSTTMKMLTGLLTPTEGEAR 327

Query: 64  VLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLKT 123
           + G  +       R ++GYM+Q FSLY +LTV++NL    Q+F +  + +  R    L  
Sbjct: 328 LFGEVLDASDMATRKRVGYMSQSFSLYSELTVRQNLLLHAQLFELPSAQIPDRVAEMLTR 387

Query: 124 YGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDLS 183
           + L +    R   +  G +QRL LA A +H PE+L LDE TS VDP  R  FW  L  LS
Sbjct: 388 FDLADAADSRPDSLPLGMRQRLQLAVAVIHRPEVLILDEPTSGVDPVARDSFWRMLIALS 447

Query: 184 AQ-GTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVE 232
            + G TI ++TH+M+EAERC R+++M AG++ A   P +L+++ G   +E
Sbjct: 448 REDGVTIFISTHFMNEAERCDRISLMHAGKVLAVGAPHELVERRGAADLE 497



 Score =  130 bits (327), Expect = 1e-34
 Identities = 76/231 (32%), Positives = 126/231 (54%), Gaps = 6/231 (2%)

Query: 1   MSDYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAG 60
           M+ +A    +V   +G   A++++ L++  G + G +GP+G GKST + ++ G+ +  +G
Sbjct: 1   MTGFAARLTHVTHTYGATHALDDVTLELPAGKMVGLIGPDGVGKSTLLALIAGVRRIQSG 60

Query: 61  QIKVLG--LSIPKQSELLRLKIGYMTQKF--SLYDDLTVQENLQFIGQIFGMNRSTLQQR 116
           ++  L   +   +       +I YM Q    +LY  L+V ENL F G++FG   +    R
Sbjct: 61  EVLALDGDMRDARHRAQSAARIAYMPQGLGRNLYPTLSVFENLDFFGRLFGQGAAERNAR 120

Query: 117 TQAQLKTYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFW 176
               L+  GL     +    +SGG KQ+L+L  A +H+P+LL LDE T+ VDP +RR+FW
Sbjct: 121 IADLLRATGLSPFGDRPAGKLSGGMKQKLSLCCALIHDPDLLILDEPTTGVDPLSRRQFW 180

Query: 177 EQLFDLSAQ--GTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQ 225
           E +  +  +    ++LV T YM+EAER   LA +  G++     P +L  Q
Sbjct: 181 ELIDRIRKRRPQMSVLVATAYMEEAERFDWLAALNDGKVIGAGTPAELRAQ 231