Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., multidrug ABC transporter ATP-binding protein from Klebsiella michiganensis M5al

 Score =  200 bits (509), Expect = 6e-56
 Identities = 95/220 (43%), Positives = 142/220 (64%)

Query: 3   DYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQI 62
           D  I A+ + K+FG F A ++++ +V+RG I+G LGPNG GKSTT +++ GLL PT+G+ 
Sbjct: 327 DTVIEAQTLTKKFGDFAATDHVDFQVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGKA 386

Query: 63  KVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLK 122
            VLG+ +   S   R  +GYM QKFSLY +L+V++NL+F   ++G+       +  +  +
Sbjct: 387 LVLGMDLKVSSGKARQHLGYMAQKFSLYGNLSVEQNLRFFSGVYGLRGREQNDKIASMSE 446

Query: 123 TYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDL 182
            +GL    +Q    +  G KQRLALA + MH P++LFLDE TS VDP  RREFW  +  +
Sbjct: 447 AFGLKSIARQAADDLPLGYKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSM 506

Query: 183 SAQGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKL 222
             +G T++VTTH+MDEAE C R+ ++  G++ A   P+ L
Sbjct: 507 VDKGVTVMVTTHFMDEAEYCDRIGLVYHGKLIASGTPDDL 546



 Score =  154 bits (388), Expect = 6e-42
 Identities = 94/308 (30%), Positives = 150/308 (48%), Gaps = 7/308 (2%)

Query: 1   MSDYAIHAENVVKQFGHFT--AIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPT 58
           MS+  I    + ++F      A+  ++  +  G + G +GP+G GK+T +R+L GLL+P 
Sbjct: 1   MSEDVITLSGLTRRFAGMDRPAVAPLDCTIHSGYVTGLVGPDGAGKTTLMRMLAGLLKPD 60

Query: 59  AGQIKVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQ 118
           AG   V+G         L   +GYM QKF LY+DLTV ENL     +  +     ++   
Sbjct: 61  AGSATVIGYDPIADDSALHAVLGYMPQKFGLYEDLTVMENLTLYADLRSVTGEAREKTFA 120

Query: 119 AQLKTYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQ 178
             L+   L     +    +SGG KQ+L LA   +  P++L LDE    VDP +RRE W+ 
Sbjct: 121 RLLEFTSLGPFTSRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQM 180

Query: 179 LFDLSAQGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVN--VVEIKAP 236
           + +L+  G  IL +T Y+DEAE+C  + +M  G++     P++L Q M     ++     
Sbjct: 181 VHELAGDGMLILWSTSYLDEAEQCRDVLLMNEGQLLYQGAPKELTQTMAGRSFLISSGEE 240

Query: 237 ALRSLKEKLLNFSQVRSAAQLGIRLRVLVHRDVIDPILWLRHTFPQLAAAELTLARPSLE 296
             R L ++ L   QV      G  +R+++ ++     +      P L  AE     P  E
Sbjct: 241 NNRRLLQRTLKLPQVSDGVIQGKSVRLILKKEASISEVQNATDMPPLEVAE---TAPRFE 297

Query: 297 DVFVTVTG 304
           D F+ + G
Sbjct: 298 DAFIDLLG 305