Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., ABC-type multidrug transport system, ATPase component from Sphingomonas koreensis DSMZ 15582

 Score =  236 bits (603), Expect = 4e-67
 Identities = 130/298 (43%), Positives = 187/298 (62%), Gaps = 6/298 (2%)

Query: 3   DYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQI 62
           D AI  E + K+FG+ T ++ ++L+V RG I GFLGPNG GK+TT+R++ GLL P  G  
Sbjct: 4   DAAISVEGLTKRFGNRTVVDTVSLEVGRGRICGFLGPNGSGKTTTLRMICGLLIPDGGGG 63

Query: 63  KVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLK 122
           +VLG+ +  Q EL++ +IGYMTQ+F L++DLT++ENL F+   +G++     +R  A L+
Sbjct: 64  EVLGMDLLTQRELIKRRIGYMTQRFGLFEDLTIRENLAFVADAYGLDEK--MKRVDAALE 121

Query: 123 TYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDL 182
             GL+ R  Q    +SGG KQRLALAA  +H+PE+L LDE T+ VDP  RREFW+Q+  L
Sbjct: 122 RLGLETRAGQLAGTLSGGWKQRLALAACVLHDPEILLLDEPTAGVDPLARREFWDQVHML 181

Query: 183 SAQGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVEIKAPALRSLK 242
           SA+GTT+LV+THYMDEAERCH +A +  G + A    ++++ Q G+  +  + P    L 
Sbjct: 182 SAEGTTVLVSTHYMDEAERCHDIAYIAYGVLLARGTADEIVVQSGLVALAGEGPGADRLA 241

Query: 243 EKLLNFSQVRSAAQLGIRLRVLVHRDVIDPILWLRHTFPQLAAAELTLARPSLEDVFV 300
            KL     V  AA  G  + V   RD+      +    P ++  E     P+LEDVF+
Sbjct: 242 PKLERAPGVAMAAAFGPTVHV-CGRDMAALRAAVADIAPGISWRE---TEPTLEDVFI 295