Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  366 bits (939), Expect = e-106
 Identities = 184/302 (60%), Positives = 227/302 (75%), Gaps = 3/302 (0%)

Query: 3   DYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQI 62
           ++AI    + + FG   A+E+++L + +G+IYGFLGPNGCGKST+IR+LTGLL PT+G I
Sbjct: 26  EFAIETRGMTRAFGGINAVEDLDLAIPKGTIYGFLGPNGCGKSTSIRMLTGLLSPTSGDI 85

Query: 63  KVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLK 122
           +VLG ++P   E LR +IGYMTQKFSLYD+L+V+ENL+F+ QI+G+NR   + R    L 
Sbjct: 86  RVLGETLPGAEEKLRRRIGYMTQKFSLYDNLSVRENLEFVAQIYGLNRRQTKARLAELLS 145

Query: 123 TYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDL 182
            Y L  R KQ    MSGGQKQRLALAAAT+H+PELLFLDE TSAVDPENRREFWE+LFDL
Sbjct: 146 LYDLAGREKQMAGSMSGGQKQRLALAAATLHHPELLFLDEPTSAVDPENRREFWERLFDL 205

Query: 183 SAQGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVEIKAPALRSLK 242
            AQGTTILV+THYMDEAERCH LAI+E G  RAD  P++LM  MG  VVE+    LR LK
Sbjct: 206 CAQGTTILVSTHYMDEAERCHGLAILERGIKRADGSPQQLMAAMGARVVEVSGEDLRKLK 265

Query: 243 EKLLNFSQVRSAAQLGIRLRVLVHRDVIDPILWLRHTFPQLAAAELTLARPSLEDVFVTV 302
           + L++ + V SAAQ+G RLRVLV   + DP+ WL    P++A   LT  RPSLEDVFVT 
Sbjct: 266 QSLISDANVLSAAQIGSRLRVLVQSSIADPLAWLS---PRVAGRALTEVRPSLEDVFVTC 322

Query: 303 TG 304
           TG
Sbjct: 323 TG 324