Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 27/285 (9%)

Query: 28  GTLERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQAS 87
           G LE   +  ++ +   + E+ + EG++V  G VL ++D++       QA A+  +A+  
Sbjct: 44  GRLEATEVQIASKTPGRLAEVQVDEGDNVIKGQVLARMDTRTLEAQRNQAEAEVVRAR-- 101

Query: 88  LNKLTNGERPEDIAVAQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDS 147
                     +++A  +A V   +++   A   L R  EL  +   S   +D  ++  D+
Sbjct: 102 ----------QNLAATEANVQLRQSEQLLAHQELKRTQELFKRGYASGQVIDQQQARVDT 151

Query: 148 AQAELASAHEEFTKLTAGARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDS 207
           A A + +A  +            +  A A +    A V     ++D+ T+ A  DG++  
Sbjct: 152 ANAAVNAARAQ------------VSAANAAIGATLAQVAQLTSEIDDSTLRAPLDGVIQL 199

Query: 208 LPYHLGERVANNAVVAIVQADRLPYARVYVPATHRAAFVVGQTVTVHVDGIKDQ-YQGKI 266
                GE +     V ++      Y  +Y+PA+      VG    + +D + ++    K+
Sbjct: 200 RLAEPGEVLGAGGRVLLMIDPNDQYMNLYLPASVAGKLAVGDEARLLLDALPERPLPAKV 259

Query: 267 RWVANEPSFTPYYALTEKERSRLMYLAEVDL--PESAMDLPSGLP 309
            +VA +  FTP    T  ER +L++  +V L  P        G+P
Sbjct: 260 SFVAAKSQFTPKEVETRDERQKLVFRVKVRLTRPGEVPQAKPGMP 304