Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., Multidrug resistance protein A from Pseudomonas fluorescens FW300-N1B4

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 18/239 (7%)

Query: 33  DRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLT 92
           D  + +A     +  + + + + V+ GDVL ++D +     L QA+A  + A+A   +LT
Sbjct: 66  DLTSLAAKVAGYVTAVEVEDNQTVRAGDVLFRIDDRDYRARLAQAVANVSAAEA---RLT 122

Query: 93  NGERPEDIAVAQARVAKARAQHKEAELTL-----NRKAELVAKQLISQSEVDAARSARDS 147
           + +    +  A  R A+A+ +   AE+ L     +R  +L+    +SQ+ VD   +AR  
Sbjct: 123 HVDAETQLQRALIRQAEAQRRSASAEMNLATKTHDRSQKLIVSNAVSQALVDETGTARSR 182

Query: 148 AQAEL--ASAHEEFTKLTAGARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGIL 205
           A+A +  ASA  E  +      +   E A A +A AQA   L Q  LD   + A  DG++
Sbjct: 183 AEATVSAASATVEAQQQRITVLVAQREAAIAAVAQAQAARDLAQIDLDSTVVHAPVDGVI 242

Query: 206 DSLPYHLGERVANNAVVAIVQADRLPYARVYVPATHRAAFV----VGQTVTVHVDGIKD 260
            +    +G  V       +   D +P   V+V A  +   +     GQ V + VDG  D
Sbjct: 243 GNRQVRVGRFV----TPGVSLLDIVPVNDVWVVANFKETQLEHIRPGQRVRITVDGYPD 297