Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 7/219 (3%)

Query: 45  IRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASL-NKLTNGERPE-DIAV 102
           + E+P+ + + VK GD+LV+LD +I    L QA+AQ A  +ASL N L      E  I  
Sbjct: 89  VYEVPVQDFQFVKAGDLLVRLDDRIYRQRLDQAIAQLAVQKASLANNLQQRRSAEATIGQ 148

Query: 103 AQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHE--EFT 160
            QA +  + AQ +++   L R   LV    +S+SE+D  R+A   A A +A A    +  
Sbjct: 149 RQAELQNSIAQSRKSAADLRRNQALVTDGSVSKSELDVTRAADAQANAAVAEARAVLQIA 208

Query: 161 KLTAGARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNA 220
           +      I +    +A +A AQA + L +  LD   I+A RDG L  +   LG  V + A
Sbjct: 209 REDLQTVIVNRGSLEASVANAQAAIELARIDLDNTRIVAPRDGQLGQIGVRLGAYVNSGA 268

Query: 221 -VVAIVQADRLPYARVYVPATHRAAFVVGQTVTVHVDGI 258
            ++A+V   R   A   +  T  A   +GQ V+  VD +
Sbjct: 269 QLMALVPEQRWIVAN--MKETQMANVRLGQPVSFTVDAL 305