Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., multidrug efflux system protein from Sinorhizobium meliloti 1021

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 20/243 (8%)

Query: 30  LERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLN 89
           +E D  T S   +  + ++ +   +HVK GD LV LD         +  A+QA+AQ +  
Sbjct: 70  IEGDIATISPKVSGYVAKVDVVANQHVKAGDPLVTLDDGDY-----RIAAEQAEAQIATQ 124

Query: 90  KLTNGERPEDIAVAQARVAKARAQHKE-------AELTLNRKAELVAKQLISQSEVDAAR 142
           KL        I+ A+A +A++ AQ K        AEL   R +EL +K   + +  D+A+
Sbjct: 125 KLALSRFDAQISGAKASLAQSEAQKKALEATVRGAELAQKRASELQSKSFGTDASRDSAQ 184

Query: 143 SARDSAQAELASAHEEFTKLTAGARIEDIEQAKAELAVAQANVTLQQQKLDE---LTIL- 198
            A D A+A LA A        A   + + +Q +AE  +   ++ L + K D     TIL 
Sbjct: 185 VALDQARANLAGAEANIAAAKANITVLEAQQMEAESTI--RSLELARDKADRDLGFTILK 242

Query: 199 ATRDGILDSLPYHLGERV-ANNAVVAIVQADRLPYARVYVPATHRAAFVVGQTVTVHVDG 257
           A  DG++ ++   +G+ V A   + A+V  D+L Y       T  A  V G  V +HVD 
Sbjct: 243 APYDGVIGNVAVQVGDLVSAGQRLAALVPTDQL-YIDANFKETQIAHLVPGSKVEIHVDA 301

Query: 258 IKD 260
            +D
Sbjct: 302 YED 304