Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., HlyD family secretion protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  239 bits (609), Expect = 8e-68
 Identities = 131/315 (41%), Positives = 200/315 (63%), Gaps = 2/315 (0%)

Query: 1   MIQSLSIASLLALLLSACSAENPPQALGTLERDRITFSATSNEIIRELPIAEGEHVKVGD 60
           +I+S    +L AL L+AC  E+     GT+ERDR+T +A + E+I E+ + EG+ V  G 
Sbjct: 3   LIKSPHWVALFALCLTACG-ESSSAVYGTVERDRLTLTAPTTELIAEIKVREGDRVSAGT 61

Query: 61  VLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQARVAKARAQHKEAELT 120
           VL++LDS+     L QA+A  A+A+A L +LT G R E++A A+AR+A ARA   EA   
Sbjct: 62  VLLQLDSRAADARLAQAVANLAQAEARLAELTKGARDEELARAEARLAGARATLSEARAQ 121

Query: 121 LNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTAGARIEDIEQAKAELAV 180
             R   LVA+++++ +++D A + +D AQA++ SA +   +L AG R E + QA A +  
Sbjct: 122 YERTVRLVAEKVLTAADLDRAVAGKDRAQADVDSASQALKELIAGTRSEQLSQAAAAVEA 181

Query: 181 AQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNAVVAIVQADRLPYARVYVPAT 240
           AQA VTL+Q+   +LT++A RD ++D LP+ +G+RV   + +  +     PY RVY+PA+
Sbjct: 182 AQAQVTLEQKFKSDLTLMAARDAVVDLLPWRVGDRVNQGSQLVGLLVQNAPYVRVYLPAS 241

Query: 241 HRAAFVVGQTVTVHVDGIKDQYQGKIRWVANEPSFTPYYALTEKERSRLMYLAEVDLPES 300
                + G  V V VDG  +   GK+R + +EP+FTP+YAL E++R+RLMYL ++DLP  
Sbjct: 242 ALDKLLPGAEVGVRVDGRPEPVMGKVRNIRSEPAFTPFYALNERDRARLMYLTDIDLPVD 301

Query: 301 AMDLPSGLPAQVDLP 315
           A  L +GL  +V LP
Sbjct: 302 A-GLATGLAVEVLLP 315