Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score = 66.6 bits (161), Expect = 8e-16
 Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 17/232 (7%)

Query: 38  SATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERP 97
           S  S   +  + + + + VK G  L ++D +I    L QA A     +A+L      ER 
Sbjct: 53  SPQSAGYVTAVTVHDFQTVKAGTPLFQIDDRIYAQKLKQAQATLEMKRAALENSEQSERA 112

Query: 98  EDIAV--AQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASA 155
               +  ++A +A A A    A  T  R   L+A+ + +QS  D ARS    AQAE A  
Sbjct: 113 AQARIRSSEAEIASAIAALDVARSTARRTEALLARGVSTQSSADQARSTL--AQAE-ALV 169

Query: 156 HEEFTKLTAGARIEDI-------EQAKAELAVAQANVTLQQQKLDELTILATRDGILDSL 208
           H+    L      ED+       +  +A++A AQA V L    L   +I+A  DG L  +
Sbjct: 170 HKSQAALDVSR--EDLRSIRVNRDSLQADIANAQAAVELATIDLHNTSIVAPIDGTLGEI 227

Query: 209 PYHLGERV-ANNAVVAIVQADRLPYARVYVPATHRAAFVVGQTVTVHVDGIK 259
              LG+ V A   + A+V A R   A      T  A   +GQ V+  VD ++
Sbjct: 228 GVRLGQYVSAGTQLAALVPARRWVIAN--FKETQLAGIQIGQAVSFRVDALQ 277