Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  105 bits (261), Expect = 2e-27
 Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 1/308 (0%)

Query: 7   IASLLALLLSACSAENPPQALGTLERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKLD 66
           I   LA LL   +A +P    G +E D +   +T+   +  + + EG+ V  GD L  +D
Sbjct: 2   IGEYLAALLGF-TAPDPNLIQGYVEGDYLYVGSTTAGRLTAVDVREGDRVDAGDRLFGVD 60

Query: 67  SQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQARVAKARAQHKEAELTLNRKAE 126
            +    L  QA A   +A+A L  L  G+RPE++A+  A V +A+A    +   L R+  
Sbjct: 61  ERAALALRDQARAVLTEAEARLGDLRKGKRPEELAMLSAAVDEAKAALAYSLRDLGRQRG 120

Query: 127 LVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTAGARIEDIEQAKAELAVAQANVT 186
           LV     S + +D A+S  D  QA    A  ++     G R + I   +A +  ++A + 
Sbjct: 121 LVGSGAASAATLDQAQSLADRDQARFDRAISDYALALQGGRADAISAQQAVVEQSRAALA 180

Query: 187 LQQQKLDELTILATRDGILDSLPYHLGERVANNAVVAIVQADRLPYARVYVPATHRAAFV 246
             +  L EL+  A    +++ + Y  GE VA    V ++          +VP     A  
Sbjct: 181 RAEVDLSELSRQAPGPALVEDILYRPGEVVAVGTPVVVLLPPENVKVVFFVPEPRLGALR 240

Query: 247 VGQTVTVHVDGIKDQYQGKIRWVANEPSFTPYYALTEKERSRLMYLAEVDLPESAMDLPS 306
           +GQ V    DG     +  I +V++   +TP    + + R++L+Y  E         L  
Sbjct: 241 IGQEVAFACDGCPSALRATIGFVSSRAEYTPPVIYSVETRAKLVYRVEARPLGPVQALHP 300

Query: 307 GLPAQVDL 314
           G P  V L
Sbjct: 301 GQPVDVRL 308