Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  100 bits (248), Expect = 7e-26
 Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 1/271 (0%)

Query: 45  IRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQ 104
           I +  + EG+ V  G VL +LD       +  A A   + QASL+K   G RP +IA A+
Sbjct: 60  IDQAMVDEGDFVTEGTVLARLDVAPYDDAVRAAEAGVGERQASLDKRVAGPRPAEIAQAK 119

Query: 105 ARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTA 164
           A  A+  A    A    ++  +L+    +S+S  D A++ R  A A + +A E    L  
Sbjct: 120 AVYAEHLANLTYARQDFDKADKLLPSGAVSRSLFDHAQAQRGVALARVDAAREALRLLEE 179

Query: 165 GARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNAVVAI 224
           G R EDI  A+A L  AQA+++  +    +  + A  DG++ S     G  VA+  +V +
Sbjct: 180 GTRAEDIAAARASLLAAQADLSSARTARRDTELKAPADGVILSRVREPGAIVASGDIVYV 239

Query: 225 VQADRLPYARVYVPATHRAAFVVGQTVTVHVDGIKDQ-YQGKIRWVANEPSFTPYYALTE 283
           +      + R YV  ++      G  V V  DG   + Y+G + +++    FTP    T 
Sbjct: 240 MSLKAPVWVRAYVSESNLGRVYPGLPVEVLTDGAPHKPYRGTVGFISPVAEFTPKTVETP 299

Query: 284 KERSRLMYLAEVDLPESAMDLPSGLPAQVDL 314
             R+ L+Y   V + ++   L  G+P  + L
Sbjct: 300 DLRTDLVYRLRVVIAQADDGLRQGMPVTLRL 330