Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., putative efflux transporter, RND family, MFP subunit from Phaeobacter inhibens DSM 17395

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 75/284 (26%), Positives = 139/284 (48%), Gaps = 44/284 (15%)

Query: 38  SATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERP 97
           S T++ ++ E P+ +G  VK GD+L KLD   + + L +A A+ ++A+  +        P
Sbjct: 108 SETTSTVLSE-PLRKGAQVKAGDLLCKLDPGTRPSTLLEAKARLSEAKIRV--------P 158

Query: 98  EDIAVAQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHE 157
           E    A+AR+ ++RA+ KEA++ L   A+L      S++ + ++++A  SA A +A+A  
Sbjct: 159 E----ARARLDESRARLKEAQINLTAAAKLSEGGFASETRLASSQAAERSAVAGVATAET 214

Query: 158 EFTKLTAGARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVA 217
                +AG     IE A A++A A       +++L  L ILA  DG+L+S    LG  + 
Sbjct: 215 GLETTSAG-----IEAASAQVAAA-------EKELARLDILAPFDGLLESDTAELGSLMQ 262

Query: 218 NNAVVA-IVQADRLPYARVYVPATHRAAFVVGQTVTVHVDGIKDQYQGKIRWVANEPSFT 276
             ++ A ++Q + +     YVP T      +G      +   ++  +GK+ +++     T
Sbjct: 263 PGSLCATVIQLETIKLVG-YVPETEVNRVTIGAGARAELANGRN-VEGKVTFISRSADPT 320

Query: 277 ------------PYYALTEKERSRLMYLAEVD----LPESAMDL 304
                       P  A+ + + + ++  AE      LP+SA+ L
Sbjct: 321 TRTFEVEITVPNPDLAIRDGQTADIVISAEGSKAHYLPQSALTL 364



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 15/151 (9%)

Query: 48  LPIAEGEHVK----VGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVA 103
           L  A GE V       DV    D+   T   ++ +A QA           G    D +  
Sbjct: 27  LAFARGEQVSDETASSDVSEPTDASATTAAASETVAPQAA----------GADKADNSGV 76

Query: 104 QARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLT 163
           +    ++ A+  ++ + L  + + + +Q+  +SE  +   +    +     A +   KL 
Sbjct: 77  RVVALRSTARGIDSAVVLRGQTQAI-RQVEVRSETTSTVLSEPLRKGAQVKAGDLLCKLD 135

Query: 164 AGARIEDIEQAKAELAVAQANVTLQQQKLDE 194
            G R   + +AKA L+ A+  V   + +LDE
Sbjct: 136 PGTRPSTLLEAKARLSEAKIRVPEARARLDE 166