Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., efflux transporter periplasmic adaptor subunit from Pedobacter sp. GW460-11-11-14-LB5

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 35/225 (15%)

Query: 2   IQSLSIASLLALLLSACSAENPPQ------ALGTLERDRITFSATSNEIIRELPIAEGEH 55
           + +L  +  + +LL++C   +  +      A G       T +  +  +  + P A  E 
Sbjct: 4   VTTLFFSVSIGMLLASCGNNDAAKKAAAAAAAGPQAYPVFTVNTQNTTLDSDYP-ATIEG 62

Query: 56  VKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQARVAKARAQHK 115
           ++  D+  K+D  I+  L+ +      K    L  +   +  + +  A+A ++ A A   
Sbjct: 63  IQNIDIRPKVDGFIEKILVDEGAV--VKKGQLLFTINAPQYEQQVRTARAAISSAEADVN 120

Query: 116 EAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTAGARIEDIEQAK 175
            A+LT+N+   LV K +IS+ ++DAA+    S +A LA                   QAK
Sbjct: 121 AAQLTVNKTKPLVEKDIISKYDLDAAQLTLQSRRAALA-------------------QAK 161

Query: 176 AELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNA 220
           AEL  AQ N       L   +I +  DG++ S+P+  G  V++++
Sbjct: 162 AELVNAQVN-------LGYTSITSPVDGVVGSIPFRNGSLVSSSS 199