Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 7/171 (4%)

Query: 45  IRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQ 104
           I E+ + + + V+ G+ L ++D +     +     Q A+A  SL     G     + VAQ
Sbjct: 56  ITEVSVRDNQIVEAGEPLFQIDPRNYRLAM-----QSAQANLSLAGQNIGASTAAVEVAQ 110

Query: 105 ARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTA 164
           A+V  A A    A+    R +EL  + ++SQ+E+D A  ARD  QA L +A  E + + A
Sbjct: 111 AKVVDAIAARNNAKEQAARVSELAGQGVLSQAELDNAIEARDRTQANLEAA--EASLVQA 168

Query: 165 GARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGER 215
              +    Q   ++  A AN+   Q  L +  + A   G++ +L   LG+R
Sbjct: 169 RQALGPAGQDNPQILAAMANLEKAQLDLQKTQVKAPSKGVVTNLQLTLGQR 219