Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  300 bits (767), Expect = 4e-86
 Identities = 160/313 (51%), Positives = 213/313 (68%)

Query: 3   QSLSIASLLALLLSACSAENPPQALGTLERDRITFSATSNEIIRELPIAEGEHVKVGDVL 62
           +SL + + L LLLS C    PPQALGTLERDR+   AT++EII  LP  EG  V  G++L
Sbjct: 5   KSLRLIAPLILLLSGCQGAEPPQALGTLERDRVLLRATTSEIITGLPKREGSLVTQGELL 64

Query: 63  VKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQARVAKARAQHKEAELTLN 122
           ++ D++ Q   +  A AQ  KAQA L +LTNGERPEDIA AQA + +A A   +AE T  
Sbjct: 65  LQFDTRKQLARVANAQAQWQKAQAYLLRLTNGERPEDIASAQANLERATAAMVQAEKTYR 124

Query: 123 RKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTAGARIEDIEQAKAELAVAQ 182
           R  +L  + L+SQ E+D A ++RD   AE  +A+E  +KL  G R EDI+QA+A L  A 
Sbjct: 125 RIDKLKRQNLVSQQELDQAVASRDQTIAEHNAANEALSKLIVGVRQEDIQQAQAALDAAA 184

Query: 183 ANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNAVVAIVQADRLPYARVYVPATHR 242
           A + L +Q L++L+I ATR G LDSLP++LGERV  NAVV  +QAD+  YARVY+PA   
Sbjct: 185 AELDLARQLLEDLSITATRSGRLDSLPFNLGERVPANAVVVAIQADKAAYARVYIPAPAM 244

Query: 243 AAFVVGQTVTVHVDGIKDQYQGKIRWVANEPSFTPYYALTEKERSRLMYLAEVDLPESAM 302
           A   +G  + VHVDG    + G +RW++ EP+FTPYYAL +++RSRL+YLAE DL + A 
Sbjct: 245 AKLTIGMQLKVHVDGQAQPFTGTLRWLSKEPAFTPYYALNQQDRSRLVYLAEFDLDDRAQ 304

Query: 303 DLPSGLPAQVDLP 315
            LP+G+PAQV+LP
Sbjct: 305 SLPTGIPAQVELP 317