Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., auxiliary transporter membrane fusion protein from Klebsiella michiganensis M5al

 Score = 57.0 bits (136), Expect = 5e-13
 Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 41/262 (15%)

Query: 6   SIASLLALLLSACSAENPPQALGTLERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKL 65
           ++A + A L+     ++P    G +  +++  +   +  I +L + + + VK G+VL ++
Sbjct: 14  ALAIIAAWLVWNYYTQSPWTRDGKVRAEQVGVTPQVSGSILQLNVRDNQLVKAGEVLFRI 73

Query: 66  DSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQARVAKARAQHKEAELTLNRKA 125
           D       L  A AQ AKA+A                    VA+A+A+ K+A    NR+ 
Sbjct: 74  DDTPYKIALLNARAQLAKAKAE-------------------VARAQAEQKKAASDANRRR 114

Query: 126 ELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTAGARIEDIEQAKAELAVAQANV 185
            L ++  IS  +++ A +A ++A   L                   E AKA + VAQA +
Sbjct: 115 HL-SQNFISAEDLENANTALNTATTNL-------------------EAAKAVVGVAQATL 154

Query: 186 TLQQQKLDELTILATRDGILDSLPYHLGERVA-NNAVVAIVQADRLPYARVYVPATHRAA 244
              Q +L +  I A  DG + +L   +G+  A  + V A+V +    Y   Y   T    
Sbjct: 155 DHAQWQLTQTEIKAPVDGWVTNLSTRVGDYAAVGHPVFALVDSHSF-YVVGYFEETKLRH 213

Query: 245 FVVGQTVTVHVDGIKDQYQGKI 266
              G +  + +   K + QG +
Sbjct: 214 IRPGDSAQIILYSSKQKLQGHV 235